Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799916.1_cds_XP_016467182.1_5947
CDS Infomation

[gene=LOC107789826] [db_xref=GeneID:107789826] [protein=CTD small phosphatase-like protein 2] [protein_id=XP_016467182.1] [location=join(7343..7511,7697..7824,8563..8662,8951..9469,9794..10131,10852..11010)] [gbkey=CDS]
Sequence

ATGCCATCGCTAAAAATGAAGACAAAGCCAGCCTCATCCAGTTCGAAAGAAAAAAATGGT
CTCCATGTTTGTCCAAATTCAAGTGTCATATCCAAGAGTTCTCTCTCCCGAACCAGAAGT
GTGCAGAATACTGAAGAAGTTGCAGATTTGATTCACAATAGTCATGATGTTCCTATCTTG
TATGAAGTATATCCCCACCAAGTCGGAAGAAATGGAGACCACGGTAATGATTTGGCAGAT
GAACTGCTTGAGAAGCAACAGCCGCCCGTTACTGATTCTGCAACCTTTGATACAATGGAG
TCTACAGCAGTAACCTGCAAATCAAGCCCAGAGACCATCTTTTCACCTAGTCTGGAGATT
GGTGCGCACAGTGAGTCTAATGTACCCAGTGATGGAGCAAGCAATGATTTTTATGTACCC
CGATTGGAGACGGAAGATAGTGATAGCAGCAGAAGTTCGTGTGGACATCAAACGTGCAAT
GTTTCAGATTTTTACATCTCTGATATGATTGTTTCTTGTTTGGCCTTCGAGGGTGAAACC
ATCTATGATGACAGTTTGACTGGCAGATTATTGTCTGATTACAAGTGTGAAGAGCCTAAT
ATCTTTACTAATGTGGATGAGGAATACTTGATGTTGCCTTTTCTTGAAGACACTGCAGCA
GCTAGCTATAGTCAAGATTGCAGAACATCGGGAGAAACTGCCATTCAGTCAGATGATTCG
AGCTTATACATGGCAATTCACCAGCTCAGATCATCTGAACAGTCTGATGCTTTCACATAT
TTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATTTTCATAAGAAATTTGCCAGAC
ATATTAGAAAGGCCAAATATTTTGCCAAAAGAATCACAAAGAAGCAAATCGATCACCCTA
GTACTTGACCTAGATGAGACACTTGTTCATTCTACACTGGAGCATTGTGATGATGCAGAC
TTCACATTTCCTGTTTTCTTCAACATGAAAGAACACGTTGTCTATGTGAGGCAGAGGCCT
CACCTCAGGACATTCTTGGAGAGAGTCGCGGAGATGTTCGAAATCGTAATTTTTACCGCT
AGTCAGAGCATATATGCGAAGCAGCTGCTAGATATACTGGATCCAGATGGAAAGATTATT
TCAAGGCGCGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACTAAGGACTTA
ACAGTATTAGGTGTTGATCTGGCAAAAGTTGTAATTATAGATAATTCCCCACAGGTTTTC
AGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGACCCTTCAGACTCT
GCACTAATTTCTTTACTTCCATTCCTAGAGGCACTGGCTGATGCTGATGATGTCCGACCT
ATCATTGCTAAGAAATTTGGTAACAAGGAATAA

Peptide Sequence

PEP ID

XP_016467182.1
PEP Infomation

PREDICTED: CTD small phosphatase-like protein 2 [Nicotiana tabacum]
Sequence

MPSLKMKTKPASSSSKEKNGLHVCPNSSVISKSSLSRTRSVQNTEEVADLIHNSHDVPIL
YEVYPHQVGRNGDHGNDLADELLEKQQPPVTDSATFDTMESTAVTCKSSPETIFSPSLEI
GAHSESNVPSDGASNDFYVPRLETEDSDSSRSSCGHQTCNVSDFYISDMIVSCLAFEGET
IYDDSLTGRLLSDYKCEEPNIFTNVDEEYLMLPFLEDTAAASYSQDCRTSGETAIQSDDS
SLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRNLPDILERPNILPKESQRSKSITL
VLDLDETLVHSTLEHCDDADFTFPVFFNMKEHVVYVRQRPHLRTFLERVAEMFEIVIFTA
SQSIYAKQLLDILDPDGKIISRRAYRESCIFSDGSYTKDLTVLGVDLAKVVIIDNSPQVF
RLQVNNGIPIKSWFDDPSDSALISLLPFLEALADADDVRPIIAKKFGNKE

Transcript Sequence

Gene sequence data has not been registered.